TOP Boutique Hotels in San Francisco, CA for 2026

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Our top choices for San Francisco boutique hotels

A room with a large window overlooking a harbor, featuring a sailboat and a building with multiple stories.

1. Argonaut Hotel

Fisherman's Wharf

Vickie

₹23,641 total

includes taxes & fees

29 Nov - 30 Nov

A hotel courtyard with outdoor seating, a fire pit, and a vintage camper parked nearby.

2. Hotel Zephyr San Francisco

Fisherman's Wharf

Raul

₹17,841 total

includes taxes & fees

22 Nov - 23 Nov

A spacious lobby with a staircase, comfortable seating areas, and large windows offering views of the city.

3. The Clancy, Autograph Collection by Marriott

Downtown San Francisco

Rosario

₹22,799 total

includes taxes & fees

21 Nov - 22 Nov

A spacious lobby with wooden floors, modern furniture, and large windows allowing natural light.

4. Hotel Kabuki, part of JdV by Hyatt

Western Addition

Filiberto

₹24,404 total

includes taxes & fees

23 Nov - 24 Nov

A cozy reading nook with a stack of books, a teal sofa, and a floor lamp.

5. Hotel Emblem San Francisco

Union Square

John

₹14,393 total

includes taxes & fees

21 Nov - 22 Nov

A spacious lobby with a reception desk, seating area, and a staircase leading to an upper level.

6. Hotel Triton Union Square San Francisco

Union Square

Fiamma

₹14,126 total

includes taxes & fees

25 Nov - 26 Nov

A modern living room with a large window overlooking a bridge, a flat-screen TV, a clock, and a brown leather sofa.

7. Harbor Court Hotel

Downtown San Francisco

Emily

₹24,509 total

includes taxes & fees

21 Nov - 22 Nov

A hotel room with two beds, a TV, a desk with a lamp, and large windows with blinds.

8. The Barnes San Francisco, Tapestry Collection by Hilton

Union Square

fereshteh

₹16,930 total

includes taxes & fees

27 Nov - 28 Nov

A grand lobby with a marble staircase, a chandelier, and a teal sofa.

9. The Marker Union Square San Francisco

Union Square

Samantha

₹15,553 total

includes taxes & fees

23 Nov - 24 Nov

A modern hotel room with a grey sofa, a dining table, a TV, and a large window with curtains.

10. The Clift Royal Sonesta San Francisco

Union Square

Randall Gray

₹20,635 total

includes taxes & fees

21 Nov - 22 Nov

View all properties

Top San Francisco Hotel Reviews

A grand entrance with a large archway, a staircase, and two wall-mounted light fixtures.

Hotel Drisco

Pacific Heights

10/10 Excellent

Andrew

A balcony with a view of a tall building, a tree, and a table with chairs.

The Huntington Hotel

Downtown San Francisco

10/10 Excellent

A fantastic return for a San Francisco icon We recently stayed for three nights at the newly reopened Huntington Hotel on Nob Hill, and we’re delighted to say it has been well worth the wait. The rooms are beautifully appointed, combining comfort with understated luxury, and the gym is one of the best hotel fitness facilities we’ve used. Every member of staff made us feel genuinely welcome, with exceptional service throughout our stay. A special thank you to the Head Concierge and the...

Mark

Argonaut Hotel

Fisherman's Wharf

10/10 Excellent

We were a bit worried when we arrived that the area outside the hotel was crazy busy and full of loud cars, bikes and music… but we had read a top tip to request a courtyard room and so actually our room was super quiet and relaxing and a nice break from the chaos of fisherman’s wharf. Restaurant breakfast was delicious but there’s also a latam coffee shop on the corner of the block directly behind the hotel who do amazing pastries. The hotel is perfectly located for the tram stop (get there...

Emma

Hotel Emblem San Francisco

Union Square

10/10 Excellent

My stay in San Francisco was part of a larger trip which also included New York and LA. Honestly the hotel was perfect for what I was looking for, very easy going. No uncomfortable pestering (although I’d recommend using the do not disturb sign to avoid being woken by housekeeping). The location was excellent and walking everywhere was super simple. One lovely lady at reception was amazing with directions and recommendations, one of which was cycling across the Golden Gate Bridge (a must...

Max

A fire feature with a modern design, surrounded by outdoor seating with cushions, and a view of the water and distant landscape.

Fairmont Heritage Place, Ghirardelli Square

Fisherman's Wharf

10/10 Excellent

Anonymous traveller

The Clancy, Autograph Collection by Marriott

Downtown San Francisco

10/10 Excellent

Matthew

Hotel Kabuki, part of JdV by Hyatt

Western Addition

10/10 Excellent

Lee

Harbor Court Hotel

Downtown San Francisco

10/10 Excellent

Anonymous traveller

A hotel room with a bed, two armchairs, a small table with a laptop and a glass of water, a lamp, a TV displaying a scenic image, and a large window with curtains.

Inn At Union Square

Union Square

10/10 Excellent

David Frederick

Hotel Triton Union Square San Francisco

Union Square

10/10 Excellent

Aashay Jayprakash

Hotel Zephyr San Francisco

Fisherman's Wharf

10/10 Excellent

joanna

A historic building with ornate architectural details, including a prominent archway with the inscription "Kensington Park."

Kensington Park Hotel

Union Square

10/10 Excellent

Ellen

A multi-story building with a fire escape, a ground-level entrance with a sign reading "Patio Hotel," and a storefront with a sign for "Liquor Deli."

Palihotel San Francisco

Union Square

10/10 Excellent

Jonathan

A spacious lobby with a grand chandelier, a long dining table, and comfortable seating.

Warwick San Francisco

Union Square

10/10 Excellent

Ian

Frequently Asked Questions

Searching for a cosy accommodation option for your visit to San Francisco?

A boutique hotel may fit the bill if you like small hotels with quality service and good atmosphere. Choose from 21 boutique-style accommodation options in San Francisco to find a property that captures this destination's local spirit.

What's the best boutique accommodation in San Francisco?

The Marker Union Square San Francisco is a favourite hotel with Expedia travellers looking for a stylish stay, and features a 24-hour fitness centre and a fireplace in the lobby. Hotel Zephyr San Francisco and Argonaut Hotel are other choices for a boutique stay.

How many boutique hotels can I expect to find in San Francisco?

Expedia has 21 boutique hotels in San Francisco.

What's there to see and do in San Francisco?

Visitors speak positively about this destination's major shopping centres, scenic landscape and art galleries. Favorite activities and sights around San Francisco include Oracle Park, Pier 39 and Chase Center. You might also want to see spots like San Francisco Bay, Westin St Francis Hotel Glass Elevators and Union Square during your trip.

What kind of weather should I plan for when I travel to San Francisco?

Getting an idea of what to expect from the weather in San Francisco will help you enjoy your stay to the fullest. The hottest months are usually September and August, with an average temperature of 18°C, while the coldest months are January and February, with an average of 11°C. Average annual precipitation for San Francisco is 448 mm.

What's the best way to get to my boutique hotel in San Francisco?

You have a few options for transportation to and around San Francisco. The closest major airport is Oakland, CA (OAK-Oakland Intl.), which is located 11.8 mi (19.1 km) away. Take advantage of metro transport at Powell St & Geary Blvd Stop, Powell St & Post St Stop and Powell St & O'Farrell St Stop.

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Search Boutique Hotels in San Francisco

Change your mind

Treat yourself

Be picky

Check prices for these dates

Our top choices for San Francisco boutique hotels

1. Argonaut Hotel

2. Hotel Zephyr San Francisco

3. The Clancy, Autograph Collection by Marriott

4. Hotel Kabuki, part of JdV by Hyatt

5. Hotel Emblem San Francisco

6. Hotel Triton Union Square San Francisco

7. Harbor Court Hotel

8. The Barnes San Francisco, Tapestry Collection by Hilton

9. The Marker Union Square San Francisco

10. The Clift Royal Sonesta San Francisco

Top San Francisco Hotel Reviews

Hotel Drisco

10/10 Excellent

Frequently Asked Questions

Searching for a cosy accommodation option for your visit to San Francisco?

What's the best boutique accommodation in San Francisco?

How many boutique hotels can I expect to find in San Francisco?

What's there to see and do in San Francisco?

What kind of weather should I plan for when I travel to San Francisco?

What's the best way to get to my boutique hotel in San Francisco?

Explore a world of travel with Expedia