What's it like in Harbor Island?

Harbor Island is a scenic neighbourhood known for its beautiful island views and array of dining options. Consider a visit to San Diego Bay as part of your Harbor Island travel plans.

Where is the best place to stay in Harbor Island?

Based on our traveller data, Sheraton San Diego Resort is one of the top choices for your stay in Harbor Island. This hotel is a short 1-minute walk from San Diego Bay, and it offers a marina and 3 outdoor pools.

How many hotels should I expect to find in the Harbor Island area?

Book one of Expedia's 6 hotels and other accommodation options in Harbor Island and start exploring everything San Diego has to offer.

If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?

Yes, the majority of hotel reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and get a refund within 24 hours of your booking. Enter dates in and click on "Search", then you can use the "fully refundable" filter to view the top deals on offer in Harbor Island.

What is there to do around this San Diego neighbourhood?

San Diego Bay is an attraction you might want to check out while you're in Harbor Island. While you're out sightseeing in San Diego, make sure that you visit other sights such as Marine Corps Recruit Depot or Port of San Diego.

The Best Hotels in Harbor Island, San Diego - 2026 Updated Prices

A harbor with multiple sailboats and a bridge in the background.

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Our top choices for Harbor Island hotels

An outdoor patio with string lights, tables, chairs, and a bar area with bottles.

1. Hilton San Diego Airport/Harbor Island

Harbor Island

Amos

₹17,855 total

includes taxes & fees

8 Nov - 9 Nov

A balcony with wicker furniture overlooking a marina and a coastal cityscape.

2. Sheraton San Diego Resort

Harbor Island

James

₹17,461 total

includes taxes & fees

23 Nov - 24 Nov

A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

3. Hampton Inn & Suites San Diego Airport Liberty Station

0.7 km from Harbor Island

MANUEL

₹16,060 total

includes taxes & fees

22 Nov - 23 Nov

A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.

4. Homewood Suites by Hilton San Diego Airport/Liberty Station

1 km from Harbor Island

Alicia

₹19,956 total

includes taxes & fees

15 Nov - 16 Nov

A resort with two-story buildings, balconies, and a pool area.

5. Humphreys Half Moon Inn

1.8 km from Harbor Island

Svenja

₹18,755 total

includes taxes & fees

23 Nov - 24 Nov

A balcony with a table set for two, overlooking a marina with numerous boats.

6. Bay Club Hotel & Marina

2 km from Harbor Island

Victoria

₹16,599 total

includes taxes & fees

28 Oct - 29 Oct

A hotel entrance with a stone archway, a reception desk, and potted plants.

7. Holiday Inn Express San Diego Airport - Old Town by IHG

2.9 km from Harbor Island

Patricia

₹14,881 total

includes taxes & fees

2 Nov - 3 Nov

A hotel courtyard with outdoor seating, palm trees, and a view of the ocean at dusk.

8. Wyndham San Diego Bayside

3.3 km from Harbor Island

Sarah

₹20,053 total

includes taxes & fees

1 Nov - 2 Nov

A modern hotel with a courtyard featuring outdoor seating, a chess table, and a well-maintained lawn.

9. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

3.4 km from Harbor Island

Evelin

₹15,677 total

includes taxes & fees

11 Nov - 12 Nov

A modern interior with a sectional sofa, a glass coffee table, and large windows offering a view of the cityscape.

10. Best Western Plus Bayside Inn

3.7 km from Harbor Island

Mariusz

₹16,173 total

includes taxes & fees

22 Nov - 23 Nov

An outdoor seating area with fire pits, lounge chairs, and a modern building in the background.

11. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

4.3 km from Harbor Island

Edith

₹18,460 total

includes taxes & fees

15 Nov - 16 Nov

A hotel lobby with a waterfall feature, outdoor seating area, and multiple floors with balconies.

12. Crowne Plaza San Diego - Mission Valley by IHG

4.4 km from Harbor Island

Thao

₹12,465 total

includes taxes & fees

29 Oct - 30 Oct

A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

13. Wyndham Garden San Diego Near SeaWorld

3.3 km from Harbor Island

Sarah

₹10,468 total

includes taxes & fees

3 Nov - 4 Nov

A hotel breakfast area with a long counter displaying various food items, including fruits, pastries, and a coffee station.

14. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

4.3 km from Harbor Island

Antonia

₹13,955 total

includes taxes & fees

15 Nov - 16 Nov

A hotel with a central courtyard, palm trees, and a fountain.

15. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Old Town San Diego, 3.8 km from Harbor Island

Kristen

₹15,677 total

includes taxes & fees

25 Nov - 26 Nov

A pool area with a hot tub, lounge chairs, and umbrellas.

16. The Dana on Mission Bay

Mission Bay, 5.4 km from Harbor Island

Assy Prune Celia

₹23,355 total

includes taxes & fees

28 Oct - 29 Oct

A spacious kitchen with a central island, wooden ceiling, and modern lighting fixtures.

17. Holiday Inn Express San Diego - SeaWorld Area by IHG

3.7 km from Harbor Island

Regina

₹13,860 total

includes taxes & fees

8 Nov - 9 Nov

A modern dining area with multiple tables and chairs, large windows, and artwork on the walls.

18. Comfort Inn San Diego Old Town

Old Town San Diego, 2.9 km from Harbor Island

George

₹12,059 total

includes taxes & fees

16 Nov - 17 Nov

An outdoor patio area with tables and chairs, string lights, and a building with balconies.

19. Fairfield Inn & Suites San Diego Old Town

Old Town San Diego, 3 km from Harbor Island

Daniel

₹13,349 total

includes taxes & fees

16 Nov - 17 Nov

A hotel room with a large window offering a city view, a bed, a chair, and a small table.

20. The DEXTRO Little Italy, BW Premier Collection

4 km from Harbor Island

Kelly

₹15,764 total

includes taxes & fees

25 Nov - 26 Nov

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Compare popular hotels in Harbor Island

Property	Property class	Guest rating
Sheraton San Diego Resort	4.0 star property	8.6 Excellent 3,798 reviews	View
Hilton San Diego Airport/Harbor Island	3.5 star property	8.8 Excellent 1,224 reviews	View
Hampton Inn & Suites San Diego Airport Liberty Station	2.5 star property	9.2 Wonderful 1,741 reviews	View
Courtyard by Marriott San Diego Airport/Liberty Station	3.0 star property	9.2 Wonderful 1,246 reviews	View
Homewood Suites by Hilton San Diego Airport/Liberty Station	3.0 star property	9.4 Exceptional 1,707 reviews	View

Where to stay in Harbor Island

Find the best Harbor Island areas for the activities you enjoy most.

A large stadium with the sign "Cobo Park" and palm trees around it.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

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A pier extending into the ocean with buildings at the end, under a partly cloudy sky.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

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