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Our top choices for Shelter Island hotels

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
0.7 km from Shelter Island
9.2 out of 10, Wonderful, (3,541 reviews)
"We had a good view of navy ships and sail boats and used the mile long side walk along the San Diego Bay entrance . The hotel is in excellent condition"
United States
Robert
The price is ₹12,512
₹14,382 total
includes taxes & fees
27 Apr - 28 Apr
Bay Club Hotel & Marina

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (2,909 reviews)
"Nice quiet location surrounded by water. Quick access to the rest of San Diego."
United States
Beth
The price is ₹16,683
₹21,040 total
includes taxes & fees
27 Apr - 28 Apr
Humphreys Half Moon Inn

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
9.0 out of 10, Wonderful, (1,613 reviews)
"Clean, friendly staff members, nice amenities, safe and quiet neighborhood, and centrally located to see various parts of the area from La Jolla to Coronado and everything in between. Great place to walk along the bay in the morning."
United States
Kimberly
The price is ₹14,972
₹17,210 total
includes taxes & fees
3 May - 4 May
Best Western Plus Island Palms Hotel & Marina

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1,452 reviews)
"Another fabulous stay at this hotel, highly recommend. Breakfast was full of choices...loved the waffles!, area kept very clean and staff attentive. Pool was lovely and refreshing, perfect temperature and very clean. Ideal location to visit local areas of interest, to include U.S.S. Midway, Seaport Village, Old Town etc etc. Will be back, thank you :) "
United States
Randall Scott
The price is ₹17,620
₹20,253 total
includes taxes & fees
26 Apr - 27 Apr
Homewood Suites by Hilton San Diego Airport/Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1,702 reviews)
"Very friendly staff helped me when I needed a little help with small things. I needed a place to rest and everyone was most kind."
United States
Denise
The price is ₹15,501
₹17,817 total
includes taxes & fees
26 Apr - 27 Apr
Hampton Inn & Suites San Diego Airport Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,298 reviews)
"Staff was amazing, rooms are ok but overall a great hotel fort the price. Amazing views and surroundings "
United States
Grace
The price is ₹16,506
₹18,973 total
includes taxes & fees
26 Apr - 27 Apr
Courtyard by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1,000 reviews)
"Great central location to everything we needed. Very close to airport, Seaport Village, Point Loma, Mission Beach, Fashion Valley Mall, etc. Welcoming staff was always available to help. Breakfast had many options. Lobby was an amazing place to hang out. Would definitely stay here again!"
United States
Jacqueline
The price is ₹16,161
₹18,576 total
includes taxes & fees
26 Apr - 27 Apr
TownePlace Suites by Marriott San Diego Airport/Liberty Station

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1,186 reviews)
"Friendly staff, clean rooms and beautiful views. Location was great for cruise port. "
United States
Claudia
The price is ₹14,444
₹16,603 total
includes taxes & fees
10 May - 11 May
Hilton San Diego Airport/Harbor Island

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1,001 reviews)
"Clean rooms and safe area. Beds were comfy. The rooms are small but functional. Had a great stay. "
United States
Erin
The price is ₹11,177
₹12,602 total
includes taxes & fees
20 Apr - 21 Apr
Sea Harbor Hotel

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.6 out of 10, Excellent, (726 reviews)
"Fantastic hotel with very friendly staff. It’s in a perfect spot to stay at. Would recommend to anyone!!"
United States
Mohammad
The price is ₹14,902
₹17,130 total
includes taxes & fees
3 May - 4 May
The Monsaraz San Diego, Tapestry Collection by Hilton

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.6 out of 10, Excellent, (1,827 reviews)
"Staff are great. Awesome location. Good breakfast, heated pool. Would stay again!"
United States
Kent
The price is ₹13,141
₹15,080 total
includes taxes & fees
20 Apr - 21 Apr
Best Western Yacht Harbor Hotel

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.4 out of 10, Very good, (1,007 reviews)
"Easy access to Shelter Island, this hotel has a good location. Room was comfortable and well appointed, and front desk was friendly and helpful."
United States
Ashley
The price is ₹12,915
₹14,846 total
includes taxes & fees
26 Apr - 27 Apr
DoubleTree by Hilton San Diego Bayside

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very good, (1,001 reviews)
"We were on our Honeymoon and we fully enjoyed our stay. It was clean and convenient with so many amenities. We are totally going back for our next San Diego trip. "
United States
Todd
The price is ₹19,438
₹27,935 total
includes taxes & fees
19 Apr - 20 Apr
Kona Kai San Diego

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1,447 reviews)
"Great location close to Shelter Island, Point Loma, Airport, not far to downtown & Old Town. Good value for budget hotel, decent breakfast. Pool looks nice but not heated so not very usable in the offseason."
United States
Halsey
The price is ₹9,842
₹11,116 total
includes taxes & fees
10 May - 11 May
Comfort Inn San Diego Airport At The Harbor

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.4 out of 10, Good, (1,003 reviews)
"Staff was great. Nice area. Hotel was a dive."
United States
Anna
The price is ₹11,061
₹12,692 total
includes taxes & fees
21 Apr - 22 Apr
Ramada by Wyndham San Diego Airport

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.4 out of 10, Good, (405 reviews)
"Amazing front desk staff! Very accommodating and excellent customer service! Great place to stay! Love the much needed appliances especially for longer term stays. Definitely recommend! 😊"
United States
lauren
The price is ₹9,483
₹10,692 total
includes taxes & fees
28 Apr - 29 Apr
Hotel Point Loma

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1,001 reviews)
"small little hotel motel very well located very clean very friendly. It's a good place to sleep. I met all my needs."
United States
Elizabeth
The price is ₹7,106
₹8,012 total
includes taxes & fees
19 Apr - 20 Apr
Hotel Aqua Mar

Sunrise Inn San Diego

Sunrise Inn San Diego
2.0 star property
1.2 km from Shelter Island
5.6 out of 10, (1,000 reviews)
"Likes: Room was very clean; Bed comfortable; HVAC very good; large flat screen tv; microwave Dislikes: unable to figure out how to access local tv channels - only had HDMI GRIT channel; no tissues in room; had trouble finding entry to office from street; office was very minimal - behind glass cubical; no help available for baggage; parking was in facility and adequate, but very limited number of spaces. Overall:Given that I was alone and only stayed overnight following an event on Shelter...
United States
Lou
The price is ₹8,807
₹9,930 total
includes taxes & fees
22 Apr - 23 Apr
Sunrise Inn San Diego

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (474 reviews)
"Fantastic hostel! Very clean and well equipped with everything you need. And so close to the beach! Great place to stay in OB! "
United States
Erik
The price is ₹5,597
₹6,322 total
includes taxes & fees
21 Apr - 22 Apr
Samesun Ocean Beach - Hostel

The Inn at Sunset Cliffs

The Inn at Sunset Cliffs
2.5 star property
Ocean Beach, 3.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,001 reviews)
"Super cute, hip, hotel with beautiful grounds and the best view of the ocean. The kids loved the pool and all the pool amenities. Drink your beverage by the firepit for the best sunset view! The only reason why I would give it four stars, is because it could use some updating, but it appears the owners are making an effort."
United States
Allen
The price is ₹20,095
₹22,657 total
includes taxes & fees
20 Apr - 21 Apr
The Inn at Sunset Cliffs
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels close to Shelter Island

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
Exterior
Bay Club Hotel & Marina
3.5 star property
9.2
Wonderful
3,541 reviews
View
Property grounds
Humphreys Half Moon Inn
3.5 star property
9.2
Wonderful
2,909 reviews
View
Exterior
Best Western Plus Island Palms Hotel & Marina
3.0 star property
9.0
Wonderful
1,613 reviews
View
Exterior
Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
9.4
Exceptional
1,452 reviews
View
Lobby
Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
9.2
Wonderful
1,702 reviews
View

Top Shelter Island Hotel Reviews

Hotels near other Shelter Island attractions

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, take a look at the 37 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Shelter Island?
Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveller data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Kona Kai San Diego.
How many hotels will I be able to find near Shelter Island?
Expedia has 37 hotels and other accommodation options within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! Most hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of your booking. Add dates, click "Search", then you can use the "fully refundable" filter to get the best deals near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego or San Diego Air and Space Museum. Explore notable local landmarks like Point Loma Lighthouse, Hotel del Coronado and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park and San Diego Civic Theatre.

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