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Our top choices for Shinjuku 3-star hotels

Nippon Seinenkan Hotel

3.5 star property
Shinjuku
9.6 out of 10, Exceptional, (1192)
"Clean, great staff, very nice hotel"
United States
Kwong Wing
Nippon Seinenkan Hotel

APA Hotel Shinjuku Kabukicho Tower

3.0 star property
Shinjuku
8.2 out of 10, Very good, (2747)
"great location, great breakfast offerings/choices"
United States
Vibian
The price is ₹6,270
₹7,586 total
5 Jan - 6 Jan 2026
APA Hotel Shinjuku Kabukicho Tower

Apa Hotel Higashi Shinjuku Kabukicho Tower

3.0 star property
Shinjuku
8.8 out of 10, Excellent, (1810)
"Will definitely stay at this hotel again in the future."
Hong Kong SAR China
Glorious
The price is ₹5,581
₹6,754 total
5 Jan - 6 Jan 2026
Apa Hotel Higashi Shinjuku Kabukicho Tower

THE KNOT TOKYO Shinjuku

3.0 star property
Shinjuku
8.8 out of 10, Excellent, (1960)
"Clean spotless staff wonderful great restaurants "
United States
joanne
The price is ₹5,609
₹6,170 total
8 Jan - 9 Jan 2026
THE KNOT TOKYO Shinjuku

Sotetsu Fresa Inn Higashi Shinjuku

3.0 star property
Shinjuku
9.0 out of 10, Wonderful, (1733)
"The staff was very attentive, the room was spotless and breakfasts were delicious."
Canada
Ross
The price is ₹7,083
₹8,570 total
4 Jan - 5 Jan 2026
Sotetsu Fresa Inn Higashi Shinjuku

SOTETSU GRAND FRESA TAKADANOBABA

3.0 star property
Shinjuku
9.4 out of 10, Exceptional, (876)
"convenient location and smooth check in out process"
Hong Kong SAR China
SAI HO
SOTETSU GRAND FRESA TAKADANOBABA

Nishitetsu Inn Shinjuku

3.0 star property
Shinjuku
8.8 out of 10, Excellent, (1004)
"Convenient location"
United States
Wen
The price is ₹19,065
₹21,116 total
25 Dec - 26 Dec
Nishitetsu Inn Shinjuku

WPÜ HOTEL SHINJUKU

3.0 star property
Shinjuku
9.2 out of 10, Wonderful, (1272)
"Nice trendy hotel . Perfect for a solo traveler "
United States
Cassandra
WPÜ HOTEL SHINJUKU

Rhodes Kagurazaka Hotel

3.0 star property
Shinjuku
7.2 out of 10, Good, (151)
"ALL THE SERVICES WITHIN THE HOTEL WERE EXCELLENT"
United States
cirilo
The price is ₹5,048
₹5,564 total
10 Dec - 11 Dec
Rhodes Kagurazaka Hotel

JR WEST GROUP VIA INN SHINJUKU

3.0 star property
Shinjuku
9.2 out of 10, Wonderful, (1058)
"Location was great!"
United States
richard Alexander
The price is ₹5,850
₹6,486 total
5 Jan - 6 Jan 2026
JR WEST GROUP VIA INN SHINJUKU

Onsen Ryokan Yuen Shinjuku

3.5 star property
Shinjuku
9.2 out of 10, Wonderful, (1004)
"Great hotel in Shinjuku, amazing onsen with a view over the city and super helpful Staff!"
United Kingdom
Marta
The price is ₹17,287
₹19,189 total
17 Dec - 18 Dec
Onsen Ryokan Yuen Shinjuku

Hotel Rose Garden Shinjuku

3.0 star property
Shinjuku
8.6 out of 10, Excellent, (1000)
"Great stay, close to all the fun spots. The staff were great as well."
Australia
Jesse
The price is ₹6,242
₹7,553 total
10 Dec - 11 Dec
Hotel Rose Garden Shinjuku

Toyoko Inn Tokyo Shinjuku Kabukicho

3.0 star property
Shinjuku
8.2 out of 10, Very good, (1000)
"Clean place to stay"
Canada
George
The price is ₹6,200
₹6,845 total
9 Jan - 10 Jan 2026
Toyoko Inn Tokyo Shinjuku Kabukicho

BESPOKE HOTEL Shinjuku

3.5 star property
Shinjuku
9.0 out of 10, Wonderful, (1007)
"Clean rooms, nice staff, conveniently located. "
United States
Paulina
BESPOKE HOTEL Shinjuku

APA Hotel Shinjuku Kabukicho Chuo

3.0 star property
Shinjuku
8.6 out of 10, Excellent, (1006)
"The breakfast was good, the bed was a good size and it had a variety of amenities."
United States
Valerie
The price is ₹6,270
₹7,586 total
5 Jan - 6 Jan 2026
APA Hotel Shinjuku Kabukicho Chuo

E Hotel Higashi Shinjuku

3.0 star property
Shinjuku
7.8 out of 10, Good, (1004)
"Great place to stay"
Australia
Simon
The price is ₹4,740
₹5,736 total
5 Jan - 6 Jan 2026
E Hotel Higashi Shinjuku

MIMARU Tokyo Shinjuku West

3.0 star property
Shinjuku
9.6 out of 10, Exceptional, (498)
"Friendly staff, clean rooms, good location"
Canada
Casey
MIMARU Tokyo Shinjuku West

APA Hotel Shinjuku Gyoemmae

3.0 star property
Shinjuku
8.4 out of 10, Very good, (1951)
"Clean room & helpful staff."
United States
Melissa
The price is ₹8,066
₹9,760 total
6 Jan - 7 Jan 2026
APA Hotel Shinjuku Gyoemmae

Keio Presso Inn Shinjuku

3.0 star property
Shinjuku
8.6 out of 10, Excellent, (660)
"good hotel to stay in tokyo"
United States
Tomio
The price is ₹8,847
₹9,731 total
6 Jan - 7 Jan 2026
Keio Presso Inn Shinjuku

Premier Hotel Cabin Shinjuku

3.0 star property
Shinjuku
8.6 out of 10, Excellent, (1000)
"Friendly staff, clean room, delicious breakfast, great location"
Australia
Billy
The price is ₹4,879
₹6,043 total
7 Jan - 8 Jan 2026
Premier Hotel Cabin Shinjuku
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Explore similar 4-star hotels

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Learn more about Shinjuku

One of Tokyo's most famous wards has world-class shopping and entertainment options galore.

Shinjuku showing a skyscraper, night scenes and skyline

Top Shinjuku Hotel Reviews

Find out more about Shinjuku

Find Your Ideal 3 Star Hotel in Shinjuku

There's a reason the top 3-star hotels in Shinjuku, Tokyo, Tokyo Prefecture, Japan are so incredibly popular: They combine comforting amenities and just-for-you service with some of the best rates and discounts the area has to offer. When you book a stay at a three star hotel in Shinjuku, you'll get affordable rates at these mid-range properties. Check through our listings and you'll find some hotels may even give you access to perfect little perks like on-site restaurants and cocktail bars, well-appointed fitness centres, and spacious rooms.

Search for a cheap deal on a 3 star hotel in Shinjuku for the most elegant experience, or grab a low rate on one of the cheap 3 star hotels in Shinjuku near the local attractions, if you want something a touch more unassuming. Whatever your travelling style, make sure to use the search tools at Expedia to track down prices, read more about amenities, and score a few local discounts.

From business trips to family getaways, the Shinjuku 3 star hotels offer a fantastic economical yet comfortable stay for any type of holiday.

Frequently asked questions

What are the best 3-star hotels in Shinjuku?
For a relaxed and comfy stay around Shinjuku, check out Citadines Central Shinjuku Tokyo. This 3-star hotel is one of the leading properties in the area according to reviews by Expedia guests.
How much does it cost to stay in a 3-star hotel in Shinjuku?
To secure a pocket-friendly 3-star hotel in Shinjuku, make use of Expedia's handy filter tool. Set your budget limit, choose your desired amenities and lots more. You also have the ability to arrange your search results so the cheapest properties appear first.

  • Search for the lowest price per night right now from ₹19,317

What is the difference between a 4-star and 3-star hotel in Shinjuku?
The big difference between a 3- and 4-star hotel in Shinjuku is the quality of service and availability of creature comforts. Three-star hotels are usually more economical and offer the services and amenities you need to ensure your comfort, such as WiFi, breakfast and a gym. You can look forward to a bit more at a 4-star hotel — think upmarket furnishings, deluxe bathroom products and extra touches like day spas.

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