A large body of water surrounded by dense forests and a winding road.

Henderson Harbor Hotels from ā‚¹6,323

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
30 Oct - 1 Nov
Next weekend
6 Nov - 8 Nov

Filter by

Property class

Guest rating

Selecting then applying a filter from this group will update the results on a new page

Our top choices for Henderson Harbor hotels

A room with a bed, a chair, a small table, and a window with a view of a lake and greenery.

1. The GillHouse

The GillHouse
2.0 star property
Henderson Harbor
10.0 out of 10, Exceptional, (39 reviews)
"Great property with a gorgeous view, cozy accommodations and nice restaurant right on site."
United States
James P
The price is ā‚¹10,681
ā‚¹11,856 total
includes taxes & fees
29 Oct - 30 Oct
The GillHouse
A four-poster bed with a canopy, a bedside table with a lamp, a chair, and a television on a stand.

2. Harbor House Inn

Harbor House Inn
2.5 star property
Sackets Harbor
9.2 out of 10, Wonderful, (316 reviews)
"Quaint, clean property. Friendly staff. Would stay again."
United States
Kenji
The price is ā‚¹16,595
ā‚¹19,341 total
includes taxes & fees
1 Nov - 2 Nov
Harbor House Inn
A large stone building with multiple towers and turrets, surrounded by a well-maintained lawn and trees.

3. Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
2.5 star property
Watertown
9.2 out of 10, Wonderful, (1,002 reviews)
"Beds were very comfortable and the breakfast that was included with our stay was awesome"
United States
Joe
The price is ā‚¹10,349
ā‚¹11,487 total
includes taxes & fees
13 Nov - 14 Nov
Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
A hotel lobby with a stone wall, green upholstered chairs, a round white table, and a beige sofa.

4. Fairfield Inn & Suites Watertown Thousand Islands

Fairfield Inn & Suites Watertown Thousand Islands
3.0 star property
Watertown
9.2 out of 10, Wonderful, (776 reviews)
"Great property to stay at."
United States
Mark
The price is ā‚¹11,023
ā‚¹12,235 total
includes taxes & fees
5 Nov - 6 Nov
Fairfield Inn & Suites Watertown Thousand Islands
A Ramada hotel entrance with a clear sky, a red awning, and two potted plants.

5. Ramada by Wyndham Watertown/Thousand Islands NY

Ramada by Wyndham Watertown/Thousand Islands NY
2.5 star property
Watertown
8.0 out of 10, Very good, (1,113 reviews)
"We had very good experience staying here."
United States
Jiewu
The price is ā‚¹8,474
ā‚¹9,406 total
includes taxes & fees
26 Nov - 27 Nov
Ramada by Wyndham Watertown/Thousand Islands NY
A hotel lobby with a bar area, seating arrangements, and a television mounted on the wall.

6. Hampton Inn Watertown

Hampton Inn Watertown
2.5 star property
Watertown
9.2 out of 10, Wonderful, (1,004 reviews)
"Great stay"
Canada
nikki
The price is ā‚¹8,564
ā‚¹9,506 total
includes taxes & fees
14 Nov - 15 Nov
Hampton Inn Watertown
A hotel room with a large bed, a nightstand, a lamp, a chair, and a window with curtains.

7. Comfort Inn & Suites Watertown - 1000 Islands

Comfort Inn & Suites Watertown - 1000 Islands
2.5 star property
Watertown
8.6 out of 10, Excellent, (1,044 reviews)
"Good overall stay, would definitely be back"
Canada
Yandry
The price is ā‚¹9,710
ā‚¹10,778 total
includes taxes & fees
19 Nov - 20 Nov
Comfort Inn & Suites Watertown - 1000 Islands
A gazebo with a stone fire pit in the center, surrounded by outdoor seating and a brick pathway.

8. Hilton Garden Inn Watertown/Thousand Islands

Hilton Garden Inn Watertown/Thousand Islands
3.0 star property
Watertown
9.2 out of 10, Wonderful, (1,001 reviews)
"Nice place to stay"
United States
melissa
The price is ā‚¹13,058
ā‚¹14,495 total
includes taxes & fees
27 Nov - 28 Nov
Hilton Garden Inn Watertown/Thousand Islands
A modern kitchen with a central island, green chairs, and a yellow pendant light.

9. Spark by Hilton Watertown

Spark by Hilton Watertown
3.0 star property
Watertown
8.2 out of 10, Very good, (93 reviews)
"Beautiful updates and friendly helpful staff. Very convenient to excellent dining options. Particularly enjoyed the breakfast options."
United States
Dianne
The price is ā‚¹7,707
ā‚¹8,555 total
includes taxes & fees
6 Nov - 7 Nov
Spark by Hilton Watertown
Front of property

10. Travel Inn

Travel Inn
2.0 star property
Watertown
6.2 out of 10, (98 reviews)
"Hotel bien"
Canada
Mario
The price is ā‚¹6,597
ā‚¹7,322 total
includes taxes & fees
28 Oct - 29 Oct
Travel Inn
An indoor swimming pool with clear water, surrounded by lounge chairs and tables, and large windows allowing natural light.

11. Adirondack Efficiencies Watertown

Adirondack Efficiencies Watertown
2.0 star property
Watertown
6.8 out of 10, (641 reviews)
"The staff was excellent and the pool was great!"
United States
James
The price is ā‚¹5,711
ā‚¹6,340 total
includes taxes & fees
28 Oct - 29 Oct
Adirondack Efficiencies Watertown
A hotel room with a bed, a bathroom with a bathtub, and a picture on the wall.

12. Days Inn by Wyndham Watertown Fort Drum

Days Inn by Wyndham Watertown Fort Drum
2.0 star property
Calcium
8.8 out of 10, Excellent, (1,002 reviews)
"Visiting my daughter for few days in Evanā€™s Mills and booked this Hotel. Excellent location and super clean , definitely staying there again."
United States
Francis
The price is ā‚¹7,311
ā‚¹8,115 total
includes taxes & fees
29 Oct - 30 Oct
Days Inn by Wyndham Watertown Fort Drum
A modern living room with a flat-screen TV, comfortable seating, and a fireplace.

13. Quality Inn & Suites Watertown Fort Drum

Quality Inn & Suites Watertown Fort Drum
2.5 star property
Calcium
8.2 out of 10, Very good, (1,005 reviews)
"Nice budget hotel, friendly staff owner involved in making it run smoothly"
United States
Jose
The price is ā‚¹6,054
ā‚¹6,720 total
includes taxes & fees
19 Nov - 20 Nov
Quality Inn & Suites Watertown Fort Drum
A modern bedroom with a bed, bedside lamp, air conditioning unit, and a mounted TV displaying a streaming service interface.

14. Nest Inn

Nest Inn
2.0 star property
Watertown
7.8 out of 10, Good, (107 reviews)
"Nice clean rooms. The staff are very helpful and friendly. Nice and approachable."
United States
Harrison
The price is ā‚¹5,336
ā‚¹6,447 total
includes taxes & fees
3 Nov - 4 Nov
Nest Inn
A room with a bed, a chair, a table, and a lamp.

15. Allen's Budget Motel

Allen's Budget Motel
2.5 star property
Watertown
8.8 out of 10, Excellent, (276 reviews)
"Location was convenient for our needs."
United States
Robert
The price is ā‚¹5,697
ā‚¹6,323 total
includes taxes & fees
2 Nov - 3 Nov
Allen's Budget Motel
A wooden exterior door with a glass panel, a stone step, and a metal doormat.

16. Royal Inn Motel

Royal Inn Motel
2.0 star property
Watertown
7.2 out of 10, Good, (451 reviews)
"Nice place, clean and very quiet. I would definitely book again"
United States
Luz
The price is ā‚¹5,863
ā‚¹6,507 total
includes taxes & fees
29 Oct - 30 Oct
Royal Inn Motel
A reception desk with a geometric patterned partition, a laptop on the counter, and a sign indicating the hotel's name.

17. Candlewood Suites Watertown Fort Drum by IHG

Candlewood Suites Watertown Fort Drum by IHG
2.5 star property
Evans Mills
8.4 out of 10, Very good, (523 reviews)
"Everything was great"
United States
Tara
The price is ā‚¹9,200
ā‚¹10,213 total
includes taxes & fees
29 Oct - 30 Oct
Candlewood Suites Watertown Fort Drum by IHG
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Stay near popular Henderson Harbor attractions

Saiff Charters

Lake Ontario comes alive with Saiff Charters' expert-guided salmon and trout fishing excursions. Experienced captains ensure a productive day on fully equipped boats while you enjoy lodging and meals.
See properties

Learn more about Henderson Harbor

Venture to sights like Lake Ontario and Saiff Charters as you discover Henderson Harbor.

See all hotels in Henderson Harbor
A large body of water surrounded by dense forests and a winding road.

Top Henderson Harbor Hotel Reviews

Spark by Hilton Watertown

Spark by Hilton Watertown

8/10 Good
"The good, Rooms are clean and nice, beds are comfortable. The bad, Coffee area not keep up, no real breakfast to speak of."
Robert 1-night trip
Posted 11 hours ago
Spark by Hilton Watertown

More cheap stays in Henderson Harbor

Quality Inn & Suites Watertown Fort Drum

Quality Inn & Suites Watertown Fort Drum

8000 Virginia Smith Drive Calcium NY
The price is ā‚¹6,054 per night from 19 Nov to 20 Nov
ā‚¹6,054
ā‚¹6,720 total
19 Nov - 20 Nov
includes taxes & fees
8.2/10 Very good! (1,005 reviews)

Frequently asked questions

Where is the best place for a stay in Henderson Harbor?
Based on our traveller data, The GillHouse is one of the top choices for your stay. This hotel is a short 1-minute walk from Lake Ontario, and it offers a restaurant and free parking. Other good options for your stay in the area are Ramada by Wyndham Watertown/Thousand Islands NY and Comfort Inn & Suites Watertown - 1000 Islands. See all available top hotels, or vacation rentals in Henderson Harbor.
If I need to cancel my hotel reservation in Henderson Harbor, will I receive a refund?
Yes! Most hotel bookings are refundable provided that you cancel before the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you have a non-refundable reservation, you might be able to cancel it and be given a refund within a 24-hour period of booking. Filter your search by fully refundable to find flexible hotel deals in Henderson Harbor.
What's the best dog-friendly accommodation option in Henderson Harbor?
The GillHouse is a top dog-friendly hotel, and offers a restaurant and a bar/lounge for its human guests. See more pet-friendly hotel accommodations in Henderson Harbor.
What are some accommodation options with pools in Henderson Harbor?
Ramada by Wyndham Watertown/Thousand Islands NY: Features daily, a seasonal outdoor pool and free self parking. Comfort Inn & Suites Watertown - 1000 Islands and Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG are a couple of other choices that offer an on-site pool. View all hotels with pools in Henderson Harbor.
How is it to stay in Henderson Harbor?
Those travelling to Henderson Harbor will definitely enjoy the sights to see and things to do. In Henderson Harbor, there are 5 hotels and other accommodation options to choose from. Find out more about Henderson Harbor.
What should I see while I'm in Henderson Harbor?
A couple of favourite places to visit are Lake Ontario and Saiff Charters. You'll also find Westcott Beach State Park and Southwick Beach State Park in the area. Take a look at what more there is to see and do in Expedia's Henderson Harbor guide.
What's the seasonal weather in Henderson Harbor?
The hottest months are usually July and August, with an average temperature of 19Ā°C, while the coldest months are January and February, with an average of -3Ā°C. The snowiest months in Henderson Harbor are January, February, March and November, with each month seeing an average of 47 cm of snowfall.

Explore a world of travel with Expedia