A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

San Juan Island Hotels from โ‚น7,057

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Check prices for these dates

Tonight
20 Sept - 21 Sept
Tomorrow
21 Sept - 22 Sept
Next weekend
25 Sept - 27 Sept
In two weeks
2 Oct - 4 Oct

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Our top choices for San Juan Island hotels

1. The Orca Inn

The Orca Inn
Friday Harbor
United States
Andrew
โ‚น9,318
โ‚น10,311 total
includes taxes & fees
1 Oct - 2 Oct
The Orca Inn

2. Discovery Inn

Discovery Inn
Friday Harbor
United States
Victoria
โ‚น16,309
โ‚น18,045 total
includes taxes & fees
4 Oct - 5 Oct
Discovery Inn

3. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
James
โ‚น22,047
โ‚น24,329 total
includes taxes & fees
1 Oct - 2 Oct
Trumpeter Inn

4. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
โ‚น20,537
โ‚น23,795 total
includes taxes & fees
12 Oct - 13 Oct
Roche Harbor Resort

5. Friday Harbor Suites

Friday Harbor Suites
Friday Harbor
United States
Jennifer
โ‚น16,031
โ‚น17,738 total
includes taxes & fees
19 Oct - 20 Oct
Friday Harbor Suites

6. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Nicole
โ‚น22,052
โ‚น24,401 total
includes taxes & fees
1 Oct - 2 Oct
Earthbox Inn & Spa

7. Snug Harbor Resort

Snug Harbor Resort
Friday Harbor
United States
Patricia
โ‚น22,918
โ‚น25,290 total
includes taxes & fees
19 Oct - 20 Oct
Snug Harbor Resort

8. Friday Harbor Grand B&B

Friday Harbor Grand B&B
Friday Harbor
United States
Andrew
โ‚น35,823
โ‚น39,638 total
includes taxes & fees
22 Sept - 23 Sept
Friday Harbor Grand B&B

9. Bird Rock Hotel

Bird Rock Hotel
Friday Harbor
United States
Vanessa
โ‚น15,340
โ‚น16,974 total
includes taxes & fees
1 Oct - 2 Oct
Bird Rock Hotel

10. Friday Harbor House

Friday Harbor House
Friday Harbor
United States
Robert
โ‚น37,881
โ‚น41,915 total
includes taxes & fees
6 Oct - 7 Oct
Friday Harbor House

11. Saturn's Return

Saturn's Return
Friday Harbor
United States
Margaret
โ‚น30,334
โ‚น33,473 total
includes taxes & fees
12 Oct - 13 Oct
Saturn's Return

12. Tucker House Inn

Tucker House Inn
Friday Harbor
United States
ZACHARY
โ‚น13,816
โ‚น15,287 total
includes taxes & fees
13 Oct - 14 Oct
Tucker House Inn

13. The Marina Inn

The Marina Inn
Anacortes
United States
Sari
โ‚น14,861
โ‚น16,673 total
includes taxes & fees
21 Sept - 22 Sept
The Marina Inn

14. Lopez Islander Resort

Lopez Islander Resort
Lopez Island
United States
Diane
โ‚น17,162
โ‚น18,938 total
includes taxes & fees
4 Oct - 5 Oct
Lopez Islander Resort

15. Deer Harbor Inn

Deer Harbor Inn
Deer Harbor
United States
Nemo
โ‚น19,444
โ‚น21,456 total
includes taxes & fees
16 Oct - 17 Oct
Deer Harbor Inn

16. Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
Anacortes
United States
Melody
โ‚น9,405
โ‚น10,431 total
includes taxes & fees
4 Oct - 5 Oct
Anacortes Ship Harbor Inn

17. Anaco Bay Inn

Anaco Bay Inn
Anacortes
United States
Todd
โ‚น9,492
โ‚น10,526 total
includes taxes & fees
21 Sept - 22 Sept
Anaco Bay Inn

18. Cap Sante Inn

Cap Sante Inn
Anacortes
United States
Raul
โ‚น4,926
โ‚น7,057 total
includes taxes & fees
30 Sept - 1 Oct
Cap Sante Inn

19. Rosario Resort

Rosario Resort
Eastsound
United States
David
โ‚น12,459
โ‚น16,145 total
includes taxes & fees
21 Oct - 22 Oct
Rosario Resort

20. Anacortes Inn

Anacortes Inn
Anacortes
United States
Ilene
โ‚น11,181
โ‚น12,592 total
includes taxes & fees
11 Oct - 12 Oct
Anacortes Inn
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Stay near popular San Juan Island attractions

A marina with boats docked, surrounded by forested hills and a town with buildings.

Roche Harbor Marina

9.4/10 (332 reviews)
Explore the waterfront in Roche Harbor with a trip to Roche Harbor Marina. While you're in the area, stroll along the seaside.
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A lighthouse on a rocky coastline with the ocean in the foreground.

Lime Kiln Point State Park

9.6/10 (317 reviews)
Also known as Whale Watch Park, this diving site is one of the best places in the world to view wild orca pods from the shore.
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A lighthouse on a rocky cliff by the sea.

San Juan Island National Historic Park

9.4/10 (184 reviews)
You can learn about the history of Friday Harbor when you stop by San Juan Island National Historic Park. While you're in the area, stroll along the waterfront.
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People preparing kayaks on a riverbank with a small office and a red-roofed building in the background.

San Juan County Park

9.0/10 (87 reviews)
A hotspot for kayakers, this scenic and diverse campsite is the perfect retreat for both those wanting to relax and adventurists.
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A lighthouse on a grassy hill overlooking a body of water with a forested hill in the background.

Cape San Juan

9.4/10 (94 reviews)
Visit the Cattle Point Lighthouse and see if you can spot some seals at the southern tip of San Juan Island.
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Whale Museum

8.8/10 (89 reviews)
You can spend an afternoon studying the exhibits at Whale Museum during your trip to Friday Harbor. While you're in the area, stroll along the waterfront.
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San Juan Islands Sculpture Park

8.8/10 (144 reviews)
Explore the great outdoors at San Juan Islands Sculpture Park, a lovely green space in Roche Harbor. While you're in the area, stroll along the seaside.
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San Juan Islands Museum of Art

8.4/10 (22 reviews)
You can spend an afternoon exploring the galleries in San Juan Islands Museum of Art during your travels in Friday Harbor. While you're in the area, stroll along the waterfront.
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Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

See all hotels in San Juan Island
A marina with numerous boats docked, a wooden pier, and a forested hill in the background.

Top San Juan Island Hotel Reviews

Friday Harbor Suites

Friday Harbor Suites

8/10 Good
"Large โ€œsuiteโ€ in a pretty dated lodging."
Michelle 1-night trip
Posted 1 hour ago
Friday Harbor Suites
Auld Holland Inn

Auld Holland Inn

8/10 Good
"The staff was friendly. All the hotels in Oak Harbor are going to have to deal with air plane noise so plan on bringing ear plugs."
Joe 1-night trip
Posted 3 hours ago
Auld Holland Inn
The Orca Inn

The Orca Inn

10/10 Excellent
"Everything was great, the rooms are dated and very small but everything was clean and the staff were amazing!"
Carlos 2-night trip
Posted 3 hours ago
The Orca Inn
Earthbox Inn & Spa

Earthbox Inn & Spa

10/10 Excellent
"Lovely unique property with beautiful gardens! We loved the locally crafted bath products and the sauna was wonderful!"
Amy 2-night trip
Posted 3 hours ago
Earthbox Inn & Spa
Coachman Inn & Suites

Coachman Inn & Suites

10/10 Excellent
"Property and room was well maintained. Plenty of space in our room. Very quiet and we enjoyed breakfast in the morning. Nice stay."
Jennifer 1-night trip
Posted 8 hours ago
Coachman Inn & Suites
Discovery Inn

Discovery Inn

10/10 Excellent
"Clean room. Nice complimentary toiletries. Close to downtown."
Shantae 1-night trip
Posted 1 day ago
Discovery Inn
Best Western Plus Oak Harbor Hotel & Conference Center

Best Western Plus Oak Harbor Hotel & Conference Center

10/10 Excellent
"My best friend and I stayed at the Best Western for a weekend in Oak Harbor, and overall, we had a really pleasant stay. The breakfast was great, and we especially loved having unlimited coffee available by the concierge areaโ€”it was such a nice touch! The hotel was consistent with the quality and service weโ€™ve come to expect and love from the Best Western brand. We had a comfortable and enjoyable stay and would definitely come back again!"
Rochelle 1-night trip
Posted 1 day ago
Best Western Plus Oak Harbor Hotel & Conference Center
Snug Harbor Resort

Snug Harbor Resort

10/10 Excellent
"Amazing place to stay. Well maintained, pristine, and friendly staff."
Niq 2-night trip
Posted 2 days ago
Snug Harbor Resort
Roche Harbor Resort

Roche Harbor Resort

10/10 Excellent
"The Hotel de Haro is from an antique vintage on San Juan Island.......built in 1886........it has original wood throughout. It has original style for the rooms with bath rooms renewed. 50 years ago my husband and I came here for our Honeymoon....September 18th 1976 was our wedding date.............came here a couple days later......it was spectacular to our delight. We have returned to experience it again and all the improvements......is wonderful to see and be here again woith my Beloved......."
Thomas 1-night trip
Posted 3 days ago
Roche Harbor Resort

More cheap stays in San Juan Island

Cap Sante Inn

Cap Sante Inn

906 9th St Anacortes WA
โ‚น4,926
โ‚น7,057 total
30 Sept - 1 Oct
includes taxes & fees
8/10 Very good! (258 reviews)
Cap Sante Inn
Auld Holland Inn

Auld Holland Inn

33575 State Route 20 Oak Harbor WA
โ‚น9,244
โ‚น10,289 total
15 Oct - 16 Oct
includes taxes & fees
8.2/10 Very good! (1,002 reviews)
Auld Holland Inn
The Orca Inn

The Orca Inn

770 Mullis St Friday Harbor WA
โ‚น9,318
โ‚น10,311 total
1 Oct - 2 Oct
includes taxes & fees
8.4/10 Very good! (156 reviews)
The Orca Inn
Anacortes Inn

Anacortes Inn

3006 Commercial Ave Anacortes WA
โ‚น11,181
โ‚น12,592 total
11 Oct - 12 Oct
includes taxes & fees
8.8/10 Excellent! (610 reviews)
Anacortes Inn
Coachman Inn & Suites

Coachman Inn & Suites

32959 Highway 20 Oak Harbor WA
โ‚น12,451
โ‚น13,859 total
6 Oct - 7 Oct
includes taxes & fees
9.2/10 Wonderful! (1,004 reviews)
Coachman Inn & Suites
The Marina Inn

The Marina Inn

3300 Commercial Ave Anacortes WA
โ‚น14,861
โ‚น16,673 total
21 Sept - 22 Sept
includes taxes & fees
The Marina Inn

Hotels in San Juan Island with star rating

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